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Summer Student Projects in Mathematical Modeling (2004)

Amy Bauer (University of Michigan)

Email: rockhopper@mcihispeed.net
Mentor: Yi Jiang

A Cellular Model of Angiogenesis

"We wish to investigate the effects of 3 different types of chemical source pro-files: 1) a point source, 2) a line source, and 3) a parabolic source, to determine which source profile most closely resembles actual blood vessel growth nearby and within a real tumor."

Ayelet Blattstein (University of Arizona)

Email: ayelet@hwr.arizona.edu
Mentors: Daniel Tartakovsky and Pieter Swart

Stochastic analysis of transient flow to a well in a heterogeneous aquifer

"It is the intention of this research to develop a methodology to infer medium properties from pressure interference tests for heterogeneous aquifers while taking into account the uncertain nature of the subsurface. "

Katy Bold (Princeton University)

Email: kbold@princeton.edu
Mentors: Aric Hagberg and Shlomo Neuman

Differential Equations on a Network: from Dynamics to Structure

"We compare classical theoretical results with numerical results in the discrete case."

Nawaf Bou-Rabee (Caltech)

Email: nawaf@caltech.edu
Mentor: Darryl Holm

Topics in Geometric Mechanics: Geometrical Monodromy

"Mathematically, this means the fiber bundle associated with the natural mechanical connection for these problems (again, for example, the magnetic vector potential in the Aharanov-Bohm effect) is non-trivial. This multivaluedness is known as geometric monodromy, in analogy with the same term arising in analytic function theory."

Pavel Bures (Czech Technical University)

Email: bures@linux.fjfi.cvut.cz
Mentors: Mikhail Shashkov, Burton Wendroff, Raphael Loubere, and Konstantin Lipnikov

A 1D Lagrangian Adaptive Mesh Refinement (AMR) Algorithm

"Our objective is to implement refinement and coarsening operators that can be plugged into the existing 1D ALE code [1]."

Nakul Chitnis (University of Arizona)

Email: nakul@grad.math.arizona.edu
Mentors: James (Mac) Hyman and J M Cushing

Modeling the spread of malaria

"Our goal with this model is to compare some of the control strategies used against malaria today and some of the ideas for future control to determine the most effective ways of reducing malarial transmission, morbidity and mortality."

Thomas Dohnal (University of New Mexico)

Email: dohnal@math.unm.edu
Mentor: Avner Peleg

Effects of disorder on solitary waves of the cubic-quintic nonlinear Schrödinger equation

"During this summer we focused on the special case of a linear gain perturbation"

Christopher Donahue (University of New Mexico)

Email: cdonahue@t7.lanl.gov
Mentor: Brendt Wohlberg

Temporal Coding in the Visual Cortex

"We are interested in building biologically inspired models of primary visual cortex (V1) that are based upon temporal coding theories. In particular, we would like to find models that reproduce these gamma oscillations, and show a direct correlation to the stimulus input."

Andrea Hawkins (Walla Walla College)

Email: hawkan@wwc.edu
Mentor: Kevin Vixie

Information Divergences

"In this paper, we introduce a statistical model to capture the similarities in images with various types of noise, and to compare the recovered image of different reconstruction models in the literature. The types of noise considered are additive gaussian, multiplicative, salt and pepper, poisson, and cracks. Currenty, our focus is on additive gaussian noise."

Srivatsan Kandadai (New Mexico State University)

Email: skandada@nmsu.edu
Mentor: Brendt Wohlberg

Directional Multiresolutional Image Analysis

"A major part of the work done this summer was to study and comprehend the rapidly growing literature on directional multiresolutional image analysis and classify the different methods based on some common approach they use. The other part of the work was to study the different properties of these methods and choose appropriate transforms for either image compression or denoising."

Triet Le (University of California - Los Angeles)

Email: tle@math.ucla.edu
Mentor: Kevin Vixie

Information Divergences

"In this paper, we introduce a statistical model to capture the similarities in images with various types of noise, and to compare the recovered image of different reconstruction models in the literature. The types of noise considered are additive gaussian, multiplicative, salt and pepper, poisson, and cracks. Currenty, our focus is on additive gaussian noise."

Evelyn Manalo Lunasin (University of California - Irvine)

Email: emanalo@math.uci.edu
Mentor: Susan Kurien

Parameter Study of the 2D-Navier-Stokes-α Model

"The goal of this research study is to explore the practicality and the effectiveness of a particular model, the NS-α (pronounced NS-alpha) model, as a subgrid model to 2D-turbulence."

Joel Miller (Churchill College)

Email: J.C.Miller@damtp.cam.ac.uk
Mentor: James (Mac) Hyman

Preventing or Reducing the Spread of Epidemics

"We have shown that in the population produced by Episims, there are vaccination strategies which improve on simply vaccinating those people who have the most contacts."

Anya Peterson (University of Arizona)

Email: apetersen@math.arizona.edu
Mentors: James (Mac) Hyman, Martin Staley, and Juan Restrepo

Nonlinear, Dispersive Partial Differential Equations

"My research at Los Alamos this summer focused on the dynamics of solutions to another nonlinear, dispersive equation."

Hernan Diego Rozenfeld (Clarkson University)

Email: rozenfhd@clarkson.edu
Mentors: Aric Hagberg and Pieter Swart

Extremal Properties on Bipartite Networks

"In this project we found the maximal clustering coefficient and assortativity on projected networks by choosing the right wiring model in the bipartite graph."

Brendan Sheehan (University of Colorado - Boulder)

Email: brendan.sheehan@colorado.edu
Mentor: Travis Austin

Adaptive Refinement for Neutron Transport

"The goal of my project was to apply adaptive spatial refinement to the neutron transport equation in two spatial dimensions."

Fangfang Shen (University of Arizona)

Email: fang@math.arizona.edu
Mentors: Brendt Wohlberg and Kevin Vixie

Wavelets and Their Applications

"We shall study wavelets from multi-resolution analysis."

Maxim Shkarayev (University of Arizona)

Email: maxim@email.arizona.edu
Mentor: Yeo-Jin Chung

Error Rate Fluctuations in High Speed Optical Fiber Communication Systems

"Objective: to verify of general results on statistical properties of error fluctuations in comunication systems with structural disorder and temporal noise."

Joshua Soneson (University of Arizona)

Email: joshs@math.arizona.edu
Mentor: Avner Peleg

Effects of Stimulated Raman Scattering on Multichannel Soliton Transmission

"The main goal of this project is to determine the effects of stimulated Raman scattering on soliton collisions while taking the stochastic nature of bitstreams into account."

Samuel Stechmann

Email: stechman@CIMS.nyu.edu
Mentor: Darryl Holm

Singular Solutions to a Partial Differential Equation for Computer Imaging

"We have studied the dynamics with respect to this norm on manifolds with symmetry, including the sphere and hyperbolic space."

Daniil Svyatskiy (University of Houston)

Email: dasvyat@ld54.math.uh.edu
Mentors: Mikhail Shashov and Konstantin Lipnikov

Mimetic Finite Difference Discretization of Diffusion-type Problems on Unstructured Polyhedral Meshes

"The main goal of this summer project is the investigation and the program realization of mimetic finite difference algorithms for a diffusion-type equation on unstructured polyhedral meshes."

Konstantin Turitsyn (Landau Institute)

Email: turitsyn@mail.ru
Mentor: Ildar Gabitov

Solitary waves stability in Maxwell-Duffing equation

"The solitary wave survives when the perturbation has one sign and it totally breaks down for the other sign. Such behaviour is property of nonintegrable equations and was not observed in any known integrable models. Analytical description of such semistability is the main aim of this work."

Pavel Vachal (Czech Technical University)

Email: vachal@galileo.fjfi.cvut.cz
Mentors: Mikhail Shashkov, Konstantin Lipnikov, and Markus Berndt

Mesh Reconnection Method for Solution of Elliptic Problems

"One of my tasks for this summer was to implement a set of routines which will adapt the mesh by node reconnection instead of refinement."

Dmitry Zakharov (Moscow State University)

Email: zakharovdmitry@mail.ru
Mentors: Ildar Gabitov and Mikhail Stepanov

Isoperiodic deformations of solutions of the Harry Dym hierarchy

"Together with Mikhail Stepanov, we have written a program that implements the deformations and explicitly constructs finite-gap solutions of KdV."

Tamer Zaki (Stanford University)

MTBI (Mathematical and Theoretical Biology Institute) Summer Students Projects (2004)

Tommy Begay (Arizona State University), Nick Dowdall (Santa Rosa College), Mat Gluck (University of California - Riverside), Olaoluwa Okunola (University of the District of Columbia), Sheree LeVarge (University of Arizona ), Miriam Nuño (Cornell University)

Email: sleepytime22_86503@yahoo.com (Tommy)
nicke@sonic.net (Nick)
cantstopmat@yahoo.com (Mat)
okun4275@eudoramail.com (Olaoluwa)
sllevarge@math.arizona.edu (Sheree)
man16@cornell.edu (Miriam)
Mentors: Carlos Castillo-Chávez and James "Mac" Hyman

Cellular Noise and The Aging Process

"We propose two mathematical models to investigate the progression of aging at the cellular level."

Diego Chowell-Puente (Universidad de Colima), Pablito Delgado (University of New Mexico), David Pèrez (Loyola Marymount University), Cynthia Hixahuary Sánchez Tapia (Universidad de Colima), Fabio Sánchez (Cornell University) and David Murillo (Arizona State University)

Email: d_chowell@hotmail.com (Diego)
TheIT1@aol.com (Pablito)
dperez7@lion.lmu.edu (David P.)
hixahuary@ucol.mx (Cynthia)
fas9@cornell.edu (Fabio)
dlm35@mathpost.la.asu.edu (David M.)
Mentors: Carlos Castillo-Chávez and James "Mac" Hyman

The Impact of Mosquito-Bird Interaction on the Spread of West Nile Virus to Human Populations

"We establish the existence of possible multiple endemic equilibria."

Jose Almora (University of North Carolina Chapel Hill), Albert Izarraraz (University of California Irvine), Qiao Liang (University of New Mexico), Crystal Nesmith (St. Mary s College of Maryland), David Murillo (Arizona State University)

Email: jalmora@email.unc.edu (Jose)
aizarrar@uci.edu (Albert)
rabbit@unm.edu (Qiao)
cnnesmith@smcm.edu (Crystal)
dlm35@mathpost.la.asu.edu (David M.)
Mentors: Carlos Castillo-Chávez and James "Mac" Hyman

Agent based modeling of Eciton burchelli swarm patterns

"We observe their reactions to different initial food distributions in a simulated ant world and determine the stability of their swarm patterns to perturbations and external factors."

Antonio Buenrostro (San Diego State University), Katie Diaz (Columbia University), Chad Gonzales (Arizona State University), Magdaliz Gorritz (University of Texas San Antonio), Anuj Mubayi (Arizona State University)

Email: antonio_b50@yahoo.com (Antonio)
kayruche@hotmail.com (Katie)
gonzales@mathpost.la.asu.edu (Chad)
magdaliz@hotmail.com (Magdaliz)
mubayi@mathpost.la.asu.edu (Anuj)
Mentors: Carlos Castillo-Chávez and James "Mac" Hyman

HIV and Its Impact on the Infant Immune System

"We observe their reactions to different initial food distributions in a simulated ant world and determine the stability of their swarm patterns to perturbations and external factors."

Anthony Billups (Northeastern University, Boston), Reynaldo Castro-Estrada (Arizona State University), Wilbert Fern (Arizona State University), Tairi Roque-Urrea (Binghamton University), Anthony Tongen (University of Arizona), Ariel Cintr#243;n-Arias (Cornell University)

Email: billups.a@neu.edu (Anthony B.)
Reynaldo.Castro@asu.edu (Reynaldo)
wfc151986@yahoo.com (Wilbert)
roque@math.binghamton.edu (Tairi)
tongen@math.arizona.edu (Anthony T.)
ariel@cam.cornell.edu (Ariel)
Mentors: Carlos Castillo-Chávez and James "Mac" Hyman

Does gravitational gossip weigh heavy on your local area network?

"We examine the effect of different networks within this mathematical framework. We propose a general mathematical model that incorporates the susceptibility and infectivity of a given machine in a local area network."

Julijana Gjorgjieva (Harvey Mudd College), Kelly Smith (Clarion University), Jessica Snyder (Georgia Institute of Technology), Gerardo Chowell (Cornell University), Fabio Sánchez (Cornell University) and Carlos Castillo-Ch ávez (Arizona State University)

Email: jgjorgjieva@hmc.edu (Julijana)
s krsmith1@clarion.edu (Kelly)
gtg208a@mail.gatech.edu (Jessica)
gc82@cornell.edu (Gerardo)
fas9@cornell.edu (Fabio)
chavez@math.la.asu.edu (Carlos)
Mentors: Carlos Castillo-Chávez and James "Mac" Hyman

The Role of Vaccination in the Control of SARS

"We assess pre-outbreak and during-outbreak vaccination as control strategies for SARS epidemics. Our model includes susceptible, latent (traced and untraced), infectious, quarantined/isolated and recovered classes. We take parameter estimates from published literature."

Arlene M. Evangelista (Arizona State University), Angela R. Ortiz (Arizona State University), Karen R. Ríos-Soto (Cornell University), Alicia Urdapilleta (Arizona State University)

Email: arlene@mathpost.asu.edu (Arlene)
angela.ortiz@asu.edu (Angela)
krr22@cornell.edu (Karen)
urdapill@mathpost.asu.edu (Alicia)
Mentors: Carlos Castillo-Chávez and James "Mac" Hyman

U.S.A. the Fast Food Nation: Obesity as an Epidemic

"The aim of this project is to study the potential role of peer-pressure in fast-food consumption as well as its effect on an individual's weight. We explore these effects on the dynamics of obesity at the population level using an epidemiological model."

Kevin Flores (University of California - Santa Barbara), Lauren Hannah (Cal Poly State University), Yi Lin (Emory University)

Email: kevin83@umail.ucsb.edu (Kevin)
lhannah@princeton.edu (Lauren)
ylin7@emory.edu (Yi)
Mentors: Carlos Castillo-Chávez and James "Mac" Hyman

Modeling of Tumor Growth and its Control via Paclitaxel Using a Delay Differential Equation

"Our research considers a mathematical model that describes tumor growth and response to treatment with a continuous, low dose treatment of the antimitotic drug Paclitaxel."

Last modified: October 15, 2004